Here is what I would do. Set up a separate import for those line items to be imported to the respective Vendor ID as a Payment to get a 1099 for that Vendor. You can elect to have the import payment for those vendors post to the correct GL account and post the cash account to a Credit Card Liability Account, on the CC import for those Vendors change the GL account to the same Credit Card Liability so the CC liability account has a net zero balance. On the large CC import you could sort by the Credit Card Liability account then copy paste those transactions into an import format for the Payment. Export a Payment to verify what is needed for the import.
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